RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g42320.1 View Network Show in Genome Browser |
| Other Names | Os03g0620800 |
| Description | Sec1 family transport protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 23545317-23547668 Nucleotide Length: 1872 |
| Protein-coding | LOC_Os03g42320 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g64650 LOC_Os01g65220 LOC_Os01g73300 LOC_Os02g03450 LOC_Os01g13350 LOC_Os02g24134 LOC_Os03g06960 LOC_Os01g73230 LOC_Os02g47440 LOC_Os01g07730 LOC_Os03g09140 More.. |
| Downstream Genes | LOC_Os04g14654 LOC_Os06g09850 LOC_Os03g57760 LOC_Os11g06810 LOC_Os04g52460 LOC_Os06g44374 LOC_Os12g05810 LOC_Os04g44810 LOC_Os08g25624 LOC_Os05g15160 LOC_Os05g07870 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g42320.1 |
| Rice Genome Annotation | LOC_Os03g42320.1 |
| Ricechip | LOC_Os03g42320.1 |
| KEGG | osa:4333468 dosa:Os03t0620800-01 |
| Entrez-Gene | 4333468 |