RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g42710.1 View Network Show in Genome Browser |
| Other Names | Os03g0625300 |
| Description | WD-40 repeat family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 23781111-23782726 Nucleotide Length: 1482 |
| Protein-coding | LOC_Os03g42710 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g33630 LOC_Os02g42590 LOC_Os03g26870 |
| Downstream Genes | LOC_Os03g54770 LOC_Os04g34080 LOC_Os08g04270 LOC_Os12g07450 LOC_Os08g38570 LOC_Os08g18150 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g42710.1 |
| Rice Genome Annotation | LOC_Os03g42710.1 |
| Ricechip | LOC_Os03g42710.1 |
| KEGG | osa:4333492 dosa:Os03t0625300-00 |
| Entrez-Gene | 4333492 |