RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g42810.2 View Network Show in Genome Browser |
| Other Names | Os03g0626500 |
| Description | endonuclease/exonuclease/phosphatase family domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 23849970-23852091 Nucleotide Length: 1008 |
| Protein-coding | LOC_Os03g42810 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g07080 LOC_Os01g58680 LOC_Os01g58690 LOC_Os01g42490 LOC_Os01g63270 |
| Downstream Genes | LOC_Os12g22620 LOC_Os06g15410 LOC_Os10g27230 LOC_Os09g36530 LOC_Os10g26164 LOC_Os07g32610 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g42810.2 |
| Rice Genome Annotation | LOC_Os03g42810.2 |
| Ricechip | LOC_Os03g42810.2 |
| KEGG | osa:4333499 dosa:Os03t0626500-00 |
| Entrez-Gene | 4333499 |