RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g42820.2 View Network Show in Genome Browser |
| Other Names | Os03g0626600 |
| Description | LIM domain-containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 23855251-23861941 Nucleotide Length: 1530 |
| Protein-coding | LOC_Os03g42820 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g59360 LOC_Os02g11890 LOC_Os01g43410 LOC_Os01g61590 LOC_Os02g03410 LOC_Os03g08960 |
| Downstream Genes | LOC_Os05g26890 LOC_Os03g46650 LOC_Os06g39050 LOC_Os05g41270 LOC_Os11g04170 LOC_Os12g03970 LOC_Os10g23090 LOC_Os05g50810 LOC_Os07g33110 LOC_Os03g57310 LOC_Os04g47300 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g42820.2 |
| Rice Genome Annotation | LOC_Os03g42820.2 |
| Ricechip | LOC_Os03g42820.2 |
| KEGG | osa:4333500 dosa:Os03t0626600-01 |
| Entrez-Gene | 4333500 |