RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g42880.1 View Network Show in Genome Browser |
| Other Names | Os03g0627300 |
| Description | nucleotide-binding protein-like, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 23907648-23913211 Nucleotide Length: 507 |
| Protein-coding | LOC_Os03g42880 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g60660 LOC_Os01g59490 LOC_Os02g05680 LOC_Os03g12910 LOC_Os03g12900 LOC_Os02g17320 LOC_Os02g47860 LOC_Os02g47020 |
| Downstream Genes | LOC_Os06g31210 LOC_Os10g26050 LOC_Os04g23820 LOC_Os03g62260 LOC_Os11g05970 LOC_Os11g16370 LOC_Os08g41790 LOC_Os09g32820 LOC_Os04g50880 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g42880.1 |
| Rice Genome Annotation | LOC_Os03g42880.1 |
| Ricechip | LOC_Os03g42880.1 |
| KEGG | osa:9271868 dosa:Os03t0627300-01 |
| Entrez-Gene | 9271868 |