RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g43410.1 View Network Show in Genome Browser |
| Other Names | Os03g0633800 |
| Description | OsIAA12 - Auxin-responsive Aux/IAA gene family member, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 24212554-24213860 Nucleotide Length: 681 |
| Protein-coding | LOC_Os03g43410 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g19590 LOC_Os02g49950 |
| Downstream Genes | LOC_Os12g40900 LOC_Os06g09660 LOC_Os05g05800 LOC_Os03g53150 LOC_Os04g57140 LOC_Os05g41990 LOC_Os12g43363 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g43410.1 |
| Rice Genome Annotation | LOC_Os03g43410.1 |
| Ricechip | LOC_Os03g43410.1 |
| KEGG | osa:4333512 dosa:Os03t0633800-01 |
| Entrez-Gene | 4333512 |