RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g43570.1 View Network Show in Genome Browser |
| Other Names | Os03g0636600 |
| Description | UBX domain-containing protein 1, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 24341231-24344785 Nucleotide Length: 615 |
| Protein-coding | LOC_Os03g43570 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g53500 LOC_Os01g57110 LOC_Os01g49000 LOC_Os02g38810 LOC_Os02g10640 LOC_Os02g56130 LOC_Os01g04910 LOC_Os02g21970 LOC_Os03g12300 LOC_Os03g08280 LOC_Os02g53230 More.. |
| Downstream Genes | LOC_Os11g18880 LOC_Os09g35710 LOC_Os10g37630 LOC_Os04g39040 LOC_Os08g43300 LOC_Os06g42810 LOC_Os10g35000 LOC_Os09g02284 LOC_Os08g08220 LOC_Os04g53720 LOC_Os07g03070 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g43570.1 |
| Rice Genome Annotation | LOC_Os03g43570.1 |
| Ricechip | LOC_Os03g43570.1 |
| KEGG | osa:4333520 dosa:Os03t0636600-01 |
| Entrez-Gene | 4333520 |