RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g43860.1 View Network Show in Genome Browser |
| Other Names | Os03g0639800 |
| Description | SNF7 domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 24596788-24600376 Nucleotide Length: 690 |
| Protein-coding | LOC_Os03g43860 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005768 | endosome | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g38300 LOC_Os01g18280 LOC_Os02g33560 LOC_Os01g01350 LOC_Os02g52280 LOC_Os02g49770 LOC_Os03g06350 LOC_Os03g01810 LOC_Os02g39290 LOC_Os01g65460 |
| Downstream Genes | LOC_Os10g34470 LOC_Os09g09480 LOC_Os05g01250 LOC_Os05g48510 LOC_Os06g20370 LOC_Os06g40620 LOC_Os12g02830 LOC_Os11g03060 LOC_Os10g32690 LOC_Os04g08450 LOC_Os07g29630 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g43860.1 |
| Rice Genome Annotation | LOC_Os03g43860.1 |
| Ricechip | LOC_Os03g43860.1 |
| KEGG | osa:4333538 dosa:Os03t0639800-01 |
| Entrez-Gene | 4333538 |