RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
General Information | |
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Locus Name | LOC_Os03g43890.1 View Network Show in Genome Browser |
Other Names | Os03g0640100 |
Description | WD domain, G-beta repeat domain containing protein, expressed |
Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 24621292-24629504 Nucleotide Length: 1287 |
Protein-coding | LOC_Os03g43890 |
Gene Ontology Classification | ||||
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GO | Name | Type | Code | |
GO:0008150 | biological_process | Biological Process | IEA | |
GO:0007049 | cell cycle | Biological Process | IEA | |
GO:0030154 | cell differentiation | Biological Process | IEA | |
GO:0016043 | cellular component organization | Biological Process | IEA | |
GO:0009987 | cellular process | Biological Process | IEA | |
GO:0006259 | DNA metabolic process | Biological Process | IEA | |
GO:0009790 | embryo development | Biological Process | IEA | |
GO:0009908 | flower development | Biological Process | IEA | |
GO:0007275 | multicellular organismal development | Biological Process | IEA | |
GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
GO:0009791 | post-embryonic development | Biological Process | IEA | |
GO:0040029 | regulation of gene expression, epigenetic | Biological Process | IEA | |
GO:0000003 | reproduction | Biological Process | IEA | |
GO:0005515 | protein binding | Molecular Function | IEA | |
GO:0005622 | intracellular | Cellular Component | IEA | |
GO:0005634 | nucleus | Cellular Component | IEA | |
GO:0009536 | plastid | Cellular Component | IEA |
Regulatory Genes ( Show Network In Viewer ) | |
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Upstream Genes | LOC_Os03g02780 LOC_Os02g45940 LOC_Os01g61920 LOC_Os01g64640 LOC_Os01g49010 LOC_Os03g08640 LOC_Os03g27310 LOC_Os02g12380 LOC_Os02g12350 LOC_Os02g07490 LOC_Os02g18820 More.. |
Downstream Genes | LOC_Os09g17850 LOC_Os10g39410 LOC_Os09g38020 LOC_Os09g26340 LOC_Os07g36500 LOC_Os05g39050 LOC_Os05g38740 LOC_Os04g49420 LOC_Os06g38470 LOC_Os11g05730 LOC_Os06g06510 More.. |
Database Links | |
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Gramene | LOC_Os03g43890.1 |
Rice Genome Annotation | LOC_Os03g43890.1 |
Ricechip | LOC_Os03g43890.1 |
KEGG | osa:4333540 dosa:Os03t0640100-01 |
Entrez-Gene | 4333540 |