RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os03g44420.1 View Network Show in Genome Browser
Other Names	Os03g0646100
Description	tubulin/FtsZ domain containing protein, putative, expressed
Gene Attributes	Chromosome: Chr3 CDS Coordinates (5'-3'): 24996576-25000965 Nucleotide Length: 1359
Protein-coding	LOC_Os03g44420

Gene Ontology Classification
GO	Name	Type	Code
GO:0009056	catabolic process	Biological Process	IEA
GO:0016043	cellular component organization	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0006139	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	Biological Process	IEA
GO:0016787	hydrolase activity	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0005198	structural molecule activity	Molecular Function	IEA
GO:0009536	plastid	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os01g33230 LOC_Os01g11260 LOC_Os02g04500 LOC_Os03g01530 LOC_Os01g59150 LOC_Os03g12320 LOC_Os02g03000 LOC_Os02g55910 LOC_Os01g54390 LOC_Os02g53770 LOC_Os02g09100 More..
Downstream Genes	LOC_Os10g40130 LOC_Os09g25580 LOC_Os11g14220 LOC_Os07g38730 LOC_Os05g06450 LOC_Os04g56970 LOC_Os07g46640 LOC_Os04g03830 LOC_Os06g43760 LOC_Os07g12850 LOC_Os06g45300 More..

miRNA Regulations
miRNAs	osa-miR172b

Pathways
Metacyc Pathways	ANAEROFRUCAT-PWY PWY-1042 PWY-3801 GLYCOLYSIS

Database Links
Gramene	LOC_Os03g44420.1
Rice Genome Annotation	LOC_Os03g44420.1
Ricechip	LOC_Os03g44420.1
KEGG	osa:4333567 dosa:Os03t0646100-01
Entrez-Gene	4333567