RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g44500.1 View Network Show in Genome Browser |
| Other Names | Os03g0646900 |
| Description | serine/threonine protein phosphatase, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 25042315-25051072 Nucleotide Length: 3012 |
| Protein-coding | LOC_Os03g44500 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g15950 LOC_Os03g31150 LOC_Os01g43680 LOC_Os01g06600 |
| Downstream Genes | LOC_Os11g15570 LOC_Os04g59010 LOC_Os04g41020 LOC_Os05g42120 LOC_Os06g18000 LOC_Os06g35770 LOC_Os12g36760 LOC_Os09g05020 LOC_Os04g49530 LOC_Os04g48170 LOC_Os04g51690 More.. |
| Reference | |
|---|---|
| PubMed | 23137285 23236132 23147796 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g44500.1 |
| Rice Genome Annotation | LOC_Os03g44500.1 |
| Ricechip | LOC_Os03g44500.1 |
| KEGG | dosa:Os03t0646900-01 |
| Entrez-Gene | 9267084 |