RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g44830.1 View Network Show in Genome Browser |
| Other Names | Os03g0651100 |
| Description | OsRhmbd9 - Putative Rhomboid homologue, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 25279410-25286387 Nucleotide Length: 1200 |
| Protein-coding | LOC_Os03g44830 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g70140 LOC_Os02g10510 LOC_Os02g08300 LOC_Os01g45620 LOC_Os02g40860 LOC_Os01g43910 LOC_Os01g47530 LOC_Os02g56560 LOC_Os02g17910 LOC_Os01g40050 LOC_Os02g02890 More.. |
| Downstream Genes | LOC_Os05g33850 LOC_Os04g55150 LOC_Os12g38860 LOC_Os03g49750 LOC_Os10g33650 LOC_Os06g26340 LOC_Os05g49140 LOC_Os09g21510 LOC_Os04g47570 LOC_Os10g06630 LOC_Os04g43490 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR3979-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g44830.1 |
| Rice Genome Annotation | LOC_Os03g44830.1 |
| Ricechip | LOC_Os03g44830.1 |
| KEGG | osa:4333592 dosa:Os03t0651100-01 |
| Entrez-Gene | 4333592 |