RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g44900.1 View Network Show in Genome Browser |
| Other Names | Os03g0652100 |
| Description | CCR4-NOT transcription factor, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 25334277-25345005 Nucleotide Length: 2571 |
| Protein-coding | LOC_Os03g44900 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g54120 LOC_Os03g07080 LOC_Os02g55300 LOC_Os01g23630 LOC_Os02g42860 LOC_Os01g09200 LOC_Os02g33140 LOC_Os02g06700 LOC_Os03g05980 LOC_Os03g01240 LOC_Os02g13530 More.. |
| Downstream Genes | LOC_Os03g52594 LOC_Os10g27230 LOC_Os12g39070 LOC_Os12g01190 LOC_Os05g43570 LOC_Os07g37790 LOC_Os04g52340 LOC_Os03g45410 LOC_Os10g40780 LOC_Os05g40790 LOC_Os09g24990 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g44900.1 |
| Rice Genome Annotation | LOC_Os03g44900.1 |
| Ricechip | LOC_Os03g44900.1 |
| KEGG | osa:4333598 dosa:Os03t0652100-01 |
| Entrez-Gene | 4333598 |