RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g45260.1 View Network Show in Genome Browser |
| Other Names | Os03g0655200 |
| Description | vesicle transport v-SNARE protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 25552406-25556486 Nucleotide Length: 735 |
| Protein-coding | LOC_Os03g45260 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g03450 LOC_Os01g59790 LOC_Os01g16030 LOC_Os02g11890 LOC_Os02g12800 LOC_Os02g12794 |
| Downstream Genes | LOC_Os08g34140 LOC_Os09g24980 LOC_Os08g18110 LOC_Os12g35360 LOC_Os05g41060 LOC_Os06g39050 LOC_Os03g59740 LOC_Os07g12200 LOC_Os07g12170 LOC_Os06g37440 LOC_Os03g57310 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g45260.1 |
| Rice Genome Annotation | LOC_Os03g45260.1 |
| Ricechip | LOC_Os03g45260.1 |
| KEGG | osa:4333608 dosa:Os03t0655200-01 |
| Entrez-Gene | 4333608 |