RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g45730.1 View Network Show in Genome Browser |
| Other Names | Os03g0659400 |
| Description | DNA-binding protein-like, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 25805321-25810839 Nucleotide Length: 2094 |
| Protein-coding | LOC_Os03g45730 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g39720 LOC_Os02g05660 LOC_Os01g72220 LOC_Os02g40460 LOC_Os02g02970 LOC_Os02g54770 LOC_Os03g17710 LOC_Os03g16110 |
| Downstream Genes | LOC_Os10g39820 LOC_Os09g39590 LOC_Os06g21470 LOC_Os04g18010 LOC_Os05g46570 LOC_Os03g63590 LOC_Os06g46400 LOC_Os09g01640 LOC_Os09g37720 LOC_Os08g01070 LOC_Os10g11034 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5151 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g45730.1 |
| Rice Genome Annotation | LOC_Os03g45730.1 |
| Ricechip | LOC_Os03g45730.1 |
| KEGG | osa:4333626 dosa:Os03t0659400-01 |
| Entrez-Gene | 4333626 |