RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g46454.1 View Network Show in Genome Browser |
| Other Names | Os03g0667300 |
| Description | metal cation transporter, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 26276301-26277206 Nucleotide Length: 705 |
| Protein-coding | LOC_Os03g46454 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0019725 | cellular homeostasis | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g53260 LOC_Os01g12100 LOC_Os03g19420 LOC_Os01g58240 LOC_Os01g38229 |
| Downstream Genes | LOC_Os08g13440 LOC_Os08g02230 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g46454.1 |
| Rice Genome Annotation | LOC_Os03g46454.1 |
| Ricechip | LOC_Os03g46454.1 |
| KEGG | osa:4333667 dosa:Os03t0667300-00 |
| Entrez-Gene | 4333667 |