RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g46490.1 View Network Show in Genome Browser |
| Other Names | Os03g0667800 |
| Description | 40S ribosomal protein S21, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 26308552-26312894 Nucleotide Length: 249 |
| Protein-coding | LOC_Os03g46490 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g13170 LOC_Os02g30050 LOC_Os01g19840 LOC_Os03g04590 LOC_Os02g56960 LOC_Os03g04750 LOC_Os02g40880 LOC_Os02g34460 LOC_Os01g48770 LOC_Os02g02130 LOC_Os02g56990 More.. |
| Downstream Genes | LOC_Os09g39500 LOC_Os05g28750 LOC_Os10g32920 LOC_Os10g32820 LOC_Os04g35090 LOC_Os05g48310 LOC_Os05g48220 LOC_Os05g48320 LOC_Os08g03450 LOC_Os12g05430 LOC_Os09g24690 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g46490.1 |
| Rice Genome Annotation | LOC_Os03g46490.1 |
| Ricechip | LOC_Os03g46490.1 |
| KEGG | osa:4333672 dosa:Os03t0667800-00 |
| Entrez-Gene | 4333672 |