RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g46750.1 View Network Show in Genome Browser |
| Other Names | Os03g0670200 |
| Description | GPI mannosyltransferase 1, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 26448826-26451482 Nucleotide Length: 1335 |
| Protein-coding | LOC_Os03g46750 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g26090 LOC_Os02g37050 LOC_Os03g12710 LOC_Os01g25110 |
| Downstream Genes | LOC_Os11g18880 LOC_Os07g03070 LOC_Os06g45080 LOC_Os11g08330 LOC_Os04g54420 LOC_Os08g01610 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00563 rn01100 |
| Metacyc Pathways | MANNOSYL-CHITO-DOLICHOLBIOSYNTHESIS PWY-5338 PWY-2901 PWY-2881 PWY-2902 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g46750.1 |
| Rice Genome Annotation | LOC_Os03g46750.1 |
| Ricechip | LOC_Os03g46750.1 |
| KEGG | osa:4333686 dosa:Os03t0670200-01 |
| Entrez-Gene | 4333686 |