RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g46770.1 View Network Show in Genome Browser |
| Other Names | Os03g0670700 |
| Description | RNA recognition motif containing protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 26460042-26461279 Nucleotide Length: 489 |
| Protein-coding | LOC_Os03g46770 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0005777 | peroxisome | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g22570 LOC_Os02g02890 LOC_Os03g25450 LOC_Os02g01560 LOC_Os01g25610 LOC_Os02g57590 LOC_Os02g39890 LOC_Os03g08050 LOC_Os03g08020 LOC_Os03g08010 LOC_Os01g67134 More.. |
| Downstream Genes | LOC_Os09g02700 LOC_Os07g10250 LOC_Os11g34200 LOC_Os09g19560 LOC_Os05g51500 LOC_Os08g22354 LOC_Os11g41890 LOC_Os07g13280 LOC_Os05g30530 LOC_Os03g59050 LOC_Os11g37080 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g46770.1 |
| Rice Genome Annotation | LOC_Os03g46770.1 |
| Ricechip | LOC_Os03g46770.1 |
| KEGG | osa:4333690 dosa:Os03t0670700-01 |
| Entrez-Gene | 4333690 |