RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g47120.1 View Network Show in Genome Browser |
| Other Names | Os03g0674300 |
| Description | CBS domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 26651598-26657847 Nucleotide Length: 1263 |
| Protein-coding | LOC_Os03g47120 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g42640 LOC_Os02g06410 LOC_Os01g40420 LOC_Os01g69900 LOC_Os01g65500 LOC_Os02g35190 LOC_Os02g12900 LOC_Os01g74650 LOC_Os01g59920 LOC_Os02g13360 |
| Downstream Genes | LOC_Os03g63940 LOC_Os08g22149 LOC_Os04g31340 LOC_Os03g52690 LOC_Os09g26190 LOC_Os12g07190 LOC_Os04g32880 LOC_Os03g56800 LOC_Os08g20570 LOC_Os06g36840 LOC_Os04g55210 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2930 osa-miR1846d-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g47120.1 |
| Rice Genome Annotation | LOC_Os03g47120.1 |
| Ricechip | LOC_Os03g47120.1 |
| KEGG | osa:4333703 dosa:Os03t0674300-01 |
| Entrez-Gene | 4333703 |