RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g47140.1 View Network Show in Genome Browser |
| Other Names | Os03g0674700 |
| Description | growth regulating factor protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 26679039-26682188 Nucleotide Length: 1281 |
| Protein-coding | LOC_Os03g47140 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g19780 |
| Downstream Genes | LOC_Os10g30640 LOC_Os10g32680 LOC_Os06g35560 LOC_Os05g32590 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR396d osa-miR396g osa-miR396h osa-miR396e-5p osa-miR396a-5p osa-miR396b-5p osa-miR396f-5p osa-miR396c-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g47140.1 |
| Rice Genome Annotation | LOC_Os03g47140.1 |
| Ricechip | LOC_Os03g47140.1 |
| KEGG | osa:4333705 dosa:Os03t0674700-01 |
| Entrez-Gene | 4333705 |