RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g47300.1 View Network Show in Genome Browser |
| Other Names | |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 26755755-26756429 Nucleotide Length: 540 |
| Protein-coding | LOC_Os03g47300 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g30200 LOC_Os03g02480 LOC_Os03g18500 LOC_Os02g53420 LOC_Os03g02260 LOC_Os01g55700 LOC_Os02g20394 LOC_Os01g06454 |
| Downstream Genes | LOC_Os07g41330 LOC_Os08g42380 LOC_Os07g22700 LOC_Os05g48810 LOC_Os05g07250 LOC_Os05g43770 LOC_Os03g61019 LOC_Os07g09450 LOC_Os08g25090 LOC_Os09g31486 LOC_Os05g03910 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g47300.1 |
| Rice Genome Annotation | LOC_Os03g47300.1 |
| Ricechip | LOC_Os03g47300.1 |