RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g47500.1 View Network Show in Genome Browser |
| Other Names | Os03g0678400 |
| Description | zinc finger, C3HC4 type domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 26862962-26865013 Nucleotide Length: 702 |
| Protein-coding | LOC_Os03g47500 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005488 | binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g46926 LOC_Os02g16040 LOC_Os01g60410 LOC_Os01g60360 LOC_Os03g21720 LOC_Os02g02830 |
| Downstream Genes | LOC_Os04g57220 LOC_Os06g30970 LOC_Os11g02464 LOC_Os12g02390 LOC_Os07g48229 LOC_Os10g20630 LOC_Os06g45380 LOC_Os04g52190 LOC_Os09g12230 LOC_Os11g35360 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g47500.1 |
| Rice Genome Annotation | LOC_Os03g47500.1 |
| Ricechip | LOC_Os03g47500.1 |
| KEGG | osa:4333714 dosa:Os03t0678400-01 |
| Entrez-Gene | 4333714 |