RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g47580.1 View Network Show in Genome Browser |
| Other Names | Os03g0679300 |
| Description | ubiquitin-conjugating enzyme, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 26916173-26924643 Nucleotide Length: 795 |
| Protein-coding | LOC_Os03g47580 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g47574 LOC_Os01g14932 LOC_Os01g68710 |
| Downstream Genes | LOC_Os11g41130 LOC_Os11g37480 LOC_Os03g50350 LOC_Os07g13530 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g47580.1 |
| Rice Genome Annotation | LOC_Os03g47580.1 |
| Ricechip | LOC_Os03g47580.1 |
| KEGG | osa:9268935 dosa:Os03t0679300-01 |
| Entrez-Gene | 9268935 |