RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g47650.1 View Network Show in Genome Browser |
| Other Names | Os03g0680200 |
| Description | ankyrin, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 26988322-26995548 Nucleotide Length: 1419 |
| Protein-coding | LOC_Os03g47650 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g01970 LOC_Os01g44130 LOC_Os01g65000 LOC_Os02g34580 LOC_Os01g61510 LOC_Os01g61550 LOC_Os03g24170 LOC_Os03g08640 LOC_Os03g24160 |
| Downstream Genes | LOC_Os12g01420 LOC_Os03g62200 LOC_Os09g37120 LOC_Os05g39240 LOC_Os03g47780 LOC_Os11g01410 LOC_Os12g01922 LOC_Os05g41880 LOC_Os07g30240 LOC_Os04g58630 LOC_Os05g19270 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR172a osa-miR172d-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g47650.1 |
| Rice Genome Annotation | LOC_Os03g47650.1 |
| Ricechip | LOC_Os03g47650.1 |
| KEGG | osa:4333723 dosa:Os03t0680200-00 |
| Entrez-Gene | 4333723 |