RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g47770.1 View Network Show in Genome Browser |
| Other Names | Os03g0681400 |
| Description | ubiquitin-conjugating enzyme E2 W, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 27111441-27116532 Nucleotide Length: 486 |
| Protein-coding | LOC_Os03g47770 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g03520 |
| Downstream Genes | LOC_Os09g12570 LOC_Os03g50440 LOC_Os05g48380 LOC_Os06g51084 LOC_Os05g25430 LOC_Os12g41220 LOC_Os04g58800 LOC_Os05g48390 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g47770.1 |
| Rice Genome Annotation | LOC_Os03g47770.1 |
| Ricechip | LOC_Os03g47770.1 |
| KEGG | osa:4333728 dosa:Os03t0681400-01 |
| Entrez-Gene | 4333728 |