RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g47780.1 View Network Show in Genome Browser |
| Other Names | Os03g0681700 |
| Description | WD repeat-containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 27120029-27123813 Nucleotide Length: 951 |
| Protein-coding | LOC_Os03g47780 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g21620 LOC_Os01g73880 LOC_Os01g47540 LOC_Os03g27260 LOC_Os02g05870 LOC_Os02g37000 LOC_Os02g47410 LOC_Os02g22780 LOC_Os01g37760 LOC_Os02g29160 LOC_Os02g04320 More.. |
| Downstream Genes | LOC_Os12g01922 LOC_Os11g01872 LOC_Os12g40780 LOC_Os07g36940 LOC_Os12g40770 LOC_Os07g42950 LOC_Os07g48290 LOC_Os03g47949 LOC_Os09g31130 LOC_Os09g33780 LOC_Os03g59020 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g47780.1 |
| Rice Genome Annotation | LOC_Os03g47780.1 |
| Ricechip | LOC_Os03g47780.1 |
| KEGG | osa:4333729 dosa:Os03t0681700-01 |
| Entrez-Gene | 4333729 |