RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g48000.3 View Network Show in Genome Browser |
| Other Names | Os03g0684400 |
| Description | CorA-like magnesium transporter protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 27287853-27294369 Nucleotide Length: 1182 |
| Protein-coding | LOC_Os03g48000 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g39710 LOC_Os01g38670 LOC_Os02g05870 LOC_Os01g38680 LOC_Os01g61380 LOC_Os01g46070 LOC_Os01g74000 LOC_Os03g05200 LOC_Os02g47320 |
| Downstream Genes | LOC_Os03g59660 LOC_Os03g57040 LOC_Os11g45710 LOC_Os08g25590 LOC_Os07g26700 LOC_Os05g30250 LOC_Os12g07190 LOC_Os08g20270 LOC_Os10g41930 LOC_Os04g33060 LOC_Os07g36800 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1846a-3p osa-miR1846b-3p osa-miR1846c-3p osa-miR5819 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g48000.3 |
| Rice Genome Annotation | LOC_Os03g48000.3 |
| Ricechip | LOC_Os03g48000.3 |
| KEGG | osa:4333741 dosa:Os03t0684400-01 |
| Entrez-Gene | 4333741 |