RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g48030.1 View Network Show in Genome Browser |
| Other Names | Os03g0684700 |
| Description | integral membrane HPP family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 27302095-27303993 Nucleotide Length: 753 |
| Protein-coding | LOC_Os03g48030 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g45400 LOC_Os03g25960 LOC_Os03g14040 LOC_Os03g02690 LOC_Os02g38240 |
| Downstream Genes | LOC_Os05g01950 LOC_Os09g15820 LOC_Os08g29370 LOC_Os07g43390 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g48030.1 |
| Rice Genome Annotation | LOC_Os03g48030.1 |
| Ricechip | LOC_Os03g48030.1 |
| KEGG | osa:4333744 dosa:Os03t0684700-01 |
| Entrez-Gene | 4333744 |