RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g48040.2 View Network Show in Genome Browser |
| Other Names | Os03g0685000 |
| Description | 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 27309859-27312904 Nucleotide Length: 546 |
| Protein-coding | LOC_Os03g48040 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g31550 LOC_Os03g22160 LOC_Os01g22520 LOC_Os02g02390 LOC_Os02g17920 LOC_Os01g58470 LOC_Os01g69950 LOC_Os01g71190 LOC_Os03g36750 LOC_Os01g40310 LOC_Os03g34040 More.. |
| Downstream Genes | LOC_Os09g33950 LOC_Os07g01930 LOC_Os05g48160 LOC_Os09g20440 LOC_Os07g18120 LOC_Os03g57690 LOC_Os07g30670 LOC_Os03g50540 LOC_Os03g57680 LOC_Os10g04860 LOC_Os03g62630 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g48040.2 |
| Rice Genome Annotation | LOC_Os03g48040.2 |
| Ricechip | LOC_Os03g48040.2 |
| KEGG | osa:4333746 dosa:Os03t0685000-01 |
| Entrez-Gene | 4333746 |