RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g48080.1 View Network Show in Genome Browser |
| Other Names | Os03g0685500 |
| Description | CHCH domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 27343286-27346711 Nucleotide Length: 417 |
| Protein-coding | LOC_Os03g48080 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g18420 LOC_Os02g20940 LOC_Os03g40180 LOC_Os02g09150 LOC_Os03g08050 LOC_Os03g08020 LOC_Os03g08010 LOC_Os03g21940 LOC_Os03g29460 LOC_Os02g37400 LOC_Os02g06640 More.. |
| Downstream Genes | LOC_Os04g44550 LOC_Os05g19370 LOC_Os06g02510 LOC_Os10g41410 LOC_Os07g46750 LOC_Os07g49400 LOC_Os09g32532 LOC_Os09g32520 LOC_Os07g07709 LOC_Os03g58050 LOC_Os12g05430 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g48080.1 |
| Rice Genome Annotation | LOC_Os03g48080.1 |
| Ricechip | LOC_Os03g48080.1 |
| KEGG | osa:4333749 dosa:Os03t0685500-01 |
| Entrez-Gene | 4333749 |