RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g48450.1 View Network Show in Genome Browser |
| Other Names | Os03g0690600 |
| Description | SCARECROW, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 27587719-27592786 Nucleotide Length: 2196 |
| Protein-coding | LOC_Os03g48450 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g48440 LOC_Os02g17910 |
| Downstream Genes | LOC_Os04g46892 LOC_Os08g07960 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g48450.1 |
| Rice Genome Annotation | LOC_Os03g48450.1 |
| Ricechip | LOC_Os03g48450.1 |
| KEGG | osa:4333775 dosa:Os03t0690600-01 |
| Entrez-Gene | 4333775 |