RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g48471.1 View Network Show in Genome Browser |
| Other Names | Os03g0690700 |
| Description | ATP synthase subunit alpha, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 27612176-27613959 Nucleotide Length: 573 |
| Protein-coding | LOC_Os03g48471 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g51470 LOC_Os01g49190 LOC_Os01g58000 LOC_Os02g07870 LOC_Os03g17070 LOC_Os01g51380 LOC_Os01g72980 LOC_Os01g48300 |
| Downstream Genes | LOC_Os07g32880 LOC_Os06g43850 LOC_Os10g17280 LOC_Os06g39740 LOC_Os07g31300 LOC_Os03g55874 LOC_Os06g02980 LOC_Os05g35320 LOC_Os05g47980 LOC_Os12g10570 LOC_Os12g19430 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g48471.1 |
| Rice Genome Annotation | LOC_Os03g48471.1 |
| Ricechip | LOC_Os03g48471.1 |
| KEGG | dosa:Os03t0690700-00 |