RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g48490.1 View Network Show in Genome Browser |
| Other Names | Os03g0691500 |
| Description | centromere protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 27652240-27659735 Nucleotide Length: 4548 |
| Protein-coding | LOC_Os03g48490 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g20980 LOC_Os01g68930 |
| Downstream Genes | LOC_Os04g54340 LOC_Os08g08030 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g48490.1 |
| Rice Genome Annotation | LOC_Os03g48490.1 |
| Ricechip | LOC_Os03g48490.1 |
| KEGG | osa:4333781 dosa:Os03t0691500-00 |
| Entrez-Gene | 4333781 |