RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g48840.2 View Network Show in Genome Browser |
| Other Names | Os03g0694800 |
| Description | ribosomal L18p/L5e family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 27823047-27825718 Nucleotide Length: 345 |
| Protein-coding | LOC_Os03g48840 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g24020 LOC_Os02g01230 LOC_Os03g34040 LOC_Os02g27760 LOC_Os03g12020 LOC_Os03g03360 LOC_Os01g62210 LOC_Os02g06700 LOC_Os02g33140 LOC_Os02g14059 LOC_Os01g10820 More.. |
| Downstream Genes | LOC_Os03g54040 LOC_Os03g51510 LOC_Os08g15460 LOC_Os05g33020 LOC_Os12g42180 LOC_Os08g21840 LOC_Os07g10720 LOC_Os03g59310 LOC_Os07g10660 LOC_Os08g01859 LOC_Os06g46930 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2929 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g48840.2 |
| Rice Genome Annotation | LOC_Os03g48840.2 |
| Ricechip | LOC_Os03g48840.2 |
| KEGG | osa:4333798 dosa:Os03t0694800-01 |
| Entrez-Gene | 4333798 |