RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g48940.2 View Network Show in Genome Browser |
| Other Names | Os03g0695700 |
| Description | chloride channel protein CLC-d, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 27862478-27871939 Nucleotide Length: 2052 |
| Protein-coding | LOC_Os03g48940 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0016049 | cell growth | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g48880 LOC_Os01g16260 LOC_Os01g17214 LOC_Os03g47120 LOC_Os03g24870 LOC_Os03g03430 LOC_Os02g02720 LOC_Os03g26090 LOC_Os03g11440 LOC_Os03g24860 LOC_Os01g57260 More.. |
| Downstream Genes | LOC_Os04g55410 LOC_Os04g32880 LOC_Os12g03860 LOC_Os11g05390 LOC_Os11g04030 LOC_Os05g50280 LOC_Os11g04020 LOC_Os08g04280 LOC_Os11g04104 LOC_Os12g03899 LOC_Os12g03830 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g48940.2 |
| Rice Genome Annotation | LOC_Os03g48940.2 |
| Ricechip | LOC_Os03g48940.2 |
| KEGG | osa:4333804 dosa:Os03t0695700-01 |
| Entrez-Gene | 4333804 |