RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g49210.1 View Network Show in Genome Browser |
| Other Names | Os03g0699200 |
| Description | BRCA1 C Terminus domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 28029404-28035119 Nucleotide Length: 1815 |
| Protein-coding | LOC_Os03g49210 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g37870 LOC_Os01g27730 LOC_Os03g22880 LOC_Os03g22890 LOC_Os03g25620 LOC_Os03g25450 LOC_Os01g33050 LOC_Os03g22350 LOC_Os01g07080 LOC_Os01g33030 LOC_Os03g22320 More.. |
| Downstream Genes | LOC_Os11g01420 LOC_Os12g01430 LOC_Os08g31810 LOC_Os03g61560 LOC_Os07g29320 LOC_Os07g20580 LOC_Os07g47580 LOC_Os07g25440 LOC_Os03g51900 LOC_Os03g63690 LOC_Os04g43140 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2919 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g49210.1 |
| Rice Genome Annotation | LOC_Os03g49210.1 |
| Ricechip | LOC_Os03g49210.1 |
| KEGG | osa:4333814 dosa:Os03t0699200-01 |
| Entrez-Gene | 4333814 |