RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g49260.1 View Network Show in Genome Browser |
| Other Names | Os03g0699700 |
| Description | lipoxygenase, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 28049441-28053725 Nucleotide Length: 2604 |
| Protein-coding | LOC_Os03g49260 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g21620 |
| Downstream Genes | LOC_Os07g48290 LOC_Os10g10360 LOC_Os05g01360 LOC_Os09g15760 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5081 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00592 rn00591 rn01100 |
| Metacyc Pathways | PWY-5409 PWY-735 PWY-5410 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g49260.1 |
| Rice Genome Annotation | LOC_Os03g49260.1 |
| Ricechip | LOC_Os03g49260.1 |
| KEGG | osa:4333818 dosa:Os03t0699700-01 |
| Entrez-Gene | 4333818 |