RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g49580.1 View Network Show in Genome Browser |
| Other Names | Os03g0702800 |
| Description | eukaryotic peptide chain release factor subunit 1-1, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 28236193-28239377 Nucleotide Length: 1314 |
| Protein-coding | LOC_Os03g49580 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g62350 LOC_Os03g18570 LOC_Os03g18580 LOC_Os02g14059 LOC_Os02g27769 LOC_Os01g04730 LOC_Os03g21940 LOC_Os03g38260 LOC_Os01g10820 LOC_Os03g05980 LOC_Os03g22340 More.. |
| Downstream Genes | LOC_Os05g38520 LOC_Os05g27940 LOC_Os04g20220 LOC_Os04g42270 LOC_Os04g27860 LOC_Os08g02340 LOC_Os11g24610 LOC_Os12g05430 LOC_Os06g35730 LOC_Os05g11710 LOC_Os11g38959 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g49580.1 |
| Rice Genome Annotation | LOC_Os03g49580.1 |
| Ricechip | LOC_Os03g49580.1 |
| KEGG | osa:4333840 dosa:Os03t0702800-01 |
| Entrez-Gene | 4333840 |