RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g49610.1 View Network Show in Genome Browser |
| Other Names | Os03g0703100 |
| Description | Os3bglu8 - beta-glucosidase, exo-beta-glucansase, high similarity to Os3bglu7, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 28248731-28254047 Nucleotide Length: 1707 |
| Protein-coding | LOC_Os03g49610 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g57590 LOC_Os01g54080 LOC_Os01g73160 LOC_Os03g08790 LOC_Os01g09860 LOC_Os02g53200 LOC_Os02g16500 LOC_Os01g67160 LOC_Os03g46600 LOC_Os03g49200 LOC_Os01g04720 More.. |
| Downstream Genes | LOC_Os12g41230 LOC_Os05g46550 LOC_Os06g20370 LOC_Os04g54810 LOC_Os07g31840 LOC_Os05g40420 LOC_Os07g01490 LOC_Os04g33690 LOC_Os10g28230 LOC_Os07g46540 LOC_Os09g25570 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00500 rn01100 rn01110 rn00460 rn00940 |
| Metacyc Pathways | PWY-5176 PWY-4441 PWY-3121 PWY-6002 |
| Reference | |
|---|---|
| PubMed | 19766588 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g49610.1 |
| Rice Genome Annotation | LOC_Os03g49610.1 |
| Ricechip | LOC_Os03g49610.1 |
| KEGG | osa:4333842 dosa:Os03t0703100-01 |
| Entrez-Gene | 4333842 |