RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g49730.2 View Network Show in Genome Browser |
| Other Names | Os03g0704200 |
| Description | zinc finger protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 28308340-28312269 Nucleotide Length: 1506 |
| Protein-coding | LOC_Os03g49730 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g14130 LOC_Os01g65230 LOC_Os01g10840 LOC_Os01g65730 LOC_Os02g39800 LOC_Os03g18830 LOC_Os03g26460 LOC_Os02g14730 LOC_Os01g14860 LOC_Os02g40430 LOC_Os01g19150 More.. |
| Downstream Genes | LOC_Os06g35530 LOC_Os05g11730 LOC_Os06g03676 LOC_Os04g42840 LOC_Os04g31610 LOC_Os08g37350 LOC_Os03g62500 LOC_Os07g29770 LOC_Os05g04340 LOC_Os10g37740 LOC_Os07g10250 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2876-3p osa-miR5499 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g49730.2 |
| Rice Genome Annotation | LOC_Os03g49730.2 |
| Ricechip | LOC_Os03g49730.2 |
| KEGG | osa:9266585 dosa:Os03t0704200-01 |
| Entrez-Gene | 9266585 |