RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g50010.1 View Network Show in Genome Browser |
| Other Names | Os03g0707900 |
| Description | toc64, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 28533089-28541241 Nucleotide Length: 1761 |
| Protein-coding | LOC_Os03g50010 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g19200 LOC_Os03g15740 LOC_Os03g44820 LOC_Os01g43030 LOC_Os01g32184 LOC_Os02g10180 LOC_Os01g74580 LOC_Os02g34830 LOC_Os02g34540 |
| Downstream Genes | LOC_Os04g10530 LOC_Os04g10460 LOC_Os06g41750 LOC_Os07g27180 LOC_Os10g32300 LOC_Os09g36740 LOC_Os07g49000 LOC_Os07g06710 LOC_Os08g44510 LOC_Os04g10410 LOC_Os07g29360 More.. |
| Pathways | |
|---|---|
| Metacyc Pathways | P345-PWY PWY6666-1 P344-PWY ARGDEG-V-PWY PWY-3161 PWY-5025 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g50010.1 |
| Rice Genome Annotation | LOC_Os03g50010.1 |
| Ricechip | LOC_Os03g50010.1 |
| KEGG | osa:4333861 dosa:Os03t0707900-01 |
| Entrez-Gene | 4333861 |