RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g50030.1 View Network Show in Genome Browser |
| Other Names | Os03g0708000 |
| Description | phospholipase A2, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 28548351-28550030 Nucleotide Length: 492 |
| Protein-coding | LOC_Os03g50030 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g48180 LOC_Os02g53520 LOC_Os01g67240 LOC_Os02g43660 LOC_Os02g44630 LOC_Os03g45400 LOC_Os02g46100 LOC_Os03g14170 LOC_Os03g02240 LOC_Os02g08230 |
| Downstream Genes | LOC_Os08g23180 LOC_Os07g44070 LOC_Os04g42620 LOC_Os04g40730 LOC_Os06g04250 LOC_Os07g26440 LOC_Os06g47940 LOC_Os07g43390 LOC_Os06g30310 LOC_Os03g50810 LOC_Os04g32030 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00592 rn01100 rn00564 rn00565 rn00591 rn00590 |
| Metacyc Pathways | PWY-735 LIPASYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g50030.1 |
| Rice Genome Annotation | LOC_Os03g50030.1 |
| Ricechip | LOC_Os03g50030.1 |
| KEGG | osa:4333862 dosa:Os03t0708000-01 |
| Entrez-Gene | 4333862 |