RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g50120.1 View Network Show in Genome Browser |
| Other Names | Os03g0708900 |
| Description | zinc finger family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 28588615-28593698 Nucleotide Length: 1515 |
| Protein-coding | LOC_Os03g50120 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g18840 LOC_Os01g72049 LOC_Os01g40250 |
| Downstream Genes | LOC_Os04g28060 LOC_Os12g06910 LOC_Os12g19590 LOC_Os09g07120 LOC_Os10g31856 LOC_Os08g21840 LOC_Os04g36890 LOC_Os07g36450 LOC_Os06g03790 LOC_Os07g41260 LOC_Os11g24570 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g50120.1 |
| Rice Genome Annotation | LOC_Os03g50120.1 |
| Ricechip | LOC_Os03g50120.1 |
| KEGG | osa:4333869 dosa:Os03t0708900-01 |
| Entrez-Gene | 4333869 |