RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g50300.1 View Network Show in Genome Browser |
| Other Names | Os03g0710900 |
| Description | CASP, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 28671296-28679049 Nucleotide Length: 2007 |
| Protein-coding | LOC_Os03g50300 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g03450 LOC_Os01g54119 LOC_Os01g66580 LOC_Os02g51430 LOC_Os02g49050 LOC_Os03g02270 LOC_Os03g23950 LOC_Os02g03060 LOC_Os02g48880 LOC_Os02g35640 LOC_Os01g73980 More.. |
| Downstream Genes | LOC_Os10g28040 LOC_Os07g42810 LOC_Os04g42370 LOC_Os03g52770 LOC_Os06g41440 LOC_Os06g51250 LOC_Os06g13000 LOC_Os06g51220 LOC_Os09g21780 LOC_Os04g57490 LOC_Os03g56820 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g50300.1 |
| Rice Genome Annotation | LOC_Os03g50300.1 |
| Ricechip | LOC_Os03g50300.1 |
| KEGG | osa:4333881 dosa:Os03t0710900-00 |
| Entrez-Gene | 4333881 |