RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g50430.1 View Network Show in Genome Browser |
| Other Names | Os03g0712200 |
| Description | zinc finger family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 28774588-28777248 Nucleotide Length: 1572 |
| Protein-coding | LOC_Os03g50430 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g07070 LOC_Os01g18100 LOC_Os02g07070 LOC_Os02g17470 LOC_Os01g08000 LOC_Os01g07980 |
| Downstream Genes | LOC_Os09g12800 LOC_Os08g41010 LOC_Os04g41470 LOC_Os04g50870 LOC_Os06g09170 LOC_Os07g06980 LOC_Os08g09350 LOC_Os08g40610 LOC_Os07g10350 LOC_Os04g42270 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g50430.1 |
| Rice Genome Annotation | LOC_Os03g50430.1 |
| Ricechip | LOC_Os03g50430.1 |
| KEGG | osa:4333891 dosa:Os03t0712200-01 |
| Entrez-Gene | 4333891 |