RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g50480.2 View Network Show in Genome Browser |
| Other Names | Os03g0712700 |
| Description | phosphoglucomutase, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 28814082-28820161 Nucleotide Length: 1518 |
| Protein-coding | LOC_Os03g50480 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0019725 | cellular homeostasis | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009605 | response to external stimulus | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g09460 LOC_Os01g74000 LOC_Os02g57180 LOC_Os02g03100 LOC_Os02g02890 LOC_Os02g32660 LOC_Os03g18070 LOC_Os02g46130 LOC_Os01g53930 LOC_Os01g63270 LOC_Os03g21620 More.. |
| Downstream Genes | LOC_Os07g09720 LOC_Os10g25130 LOC_Os05g09500 LOC_Os09g38030 LOC_Os04g01600 LOC_Os10g11140 LOC_Os05g44210 LOC_Os03g61710 LOC_Os03g61690 LOC_Os07g42600 LOC_Os08g02130 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g50480.2 |
| Rice Genome Annotation | LOC_Os03g50480.2 |
| Ricechip | LOC_Os03g50480.2 |
| KEGG | osa:4333895 dosa:Os03t0712700-01 |
| Entrez-Gene | 4333895 |