RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g50520.1 View Network Show in Genome Browser |
| Other Names | Os03g0713100 |
| Description | dynamin family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 28846822-28852769 Nucleotide Length: 1836 |
| Protein-coding | LOC_Os03g50520 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g07870 LOC_Os02g21250 LOC_Os02g57240 LOC_Os02g50550 LOC_Os02g55440 LOC_Os01g23620 LOC_Os03g27290 LOC_Os01g16030 LOC_Os03g12250 LOC_Os02g05680 LOC_Os01g56330 More.. |
| Downstream Genes | LOC_Os07g10110 LOC_Os05g48240 LOC_Os06g47330 LOC_Os05g32390 LOC_Os12g10560 LOC_Os07g10150 LOC_Os06g37160 LOC_Os03g64320 LOC_Os03g63710 LOC_Os05g38720 LOC_Os07g31720 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g50520.1 |
| Rice Genome Annotation | LOC_Os03g50520.1 |
| Ricechip | LOC_Os03g50520.1 |
| KEGG | osa:4333899 dosa:Os03t0713100-01 |
| Entrez-Gene | 4333899 |