RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g50810.1 View Network Show in Genome Browser |
| Other Names | Os03g0717000 |
| Description | receptor protein kinase TMK1 precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 29015978-29020079 Nucleotide Length: 2889 |
| Protein-coding | LOC_Os03g50810 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0004872 | receptor activity | Molecular Function | IEA | |
| GO:0004871 | signal transducer activity | Molecular Function | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g44630 LOC_Os03g14040 LOC_Os02g42380 LOC_Os03g36540 LOC_Os02g15690 LOC_Os02g53200 LOC_Os02g05630 LOC_Os01g37590 LOC_Os02g15594 LOC_Os01g42520 LOC_Os03g32790 More.. |
| Downstream Genes | LOC_Os06g05550 LOC_Os08g17410 LOC_Os04g38570 LOC_Os05g22730 LOC_Os04g57800 LOC_Os07g38530 LOC_Os04g44440 LOC_Os03g62780 LOC_Os09g36520 LOC_Os03g55930 LOC_Os07g32380 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00760 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g50810.1 |
| Rice Genome Annotation | LOC_Os03g50810.1 |
| Ricechip | LOC_Os03g50810.1 |
| KEGG | osa:4333912 dosa:Os03t0717000-01 |
| Entrez-Gene | 4333912 |