RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g50940.1 View Network Show in Genome Browser |
| Other Names | Os03g0718600 |
| Description | cytochrome c oxidase assembly protein COX11, mitochondrial precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 29100595-29103586 Nucleotide Length: 735 |
| Protein-coding | LOC_Os03g50940 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g34390 LOC_Os03g10360 LOC_Os01g04260 LOC_Os02g28810 LOC_Os02g32120 LOC_Os01g53700 LOC_Os01g73550 LOC_Os03g11410 LOC_Os01g51390 LOC_Os03g46200 LOC_Os01g57110 More.. |
| Downstream Genes | LOC_Os04g28180 LOC_Os09g26760 LOC_Os04g32660 LOC_Os03g58030 LOC_Os07g04240 LOC_Os06g04500 LOC_Os05g44916 LOC_Os08g38720 LOC_Os09g20440 LOC_Os10g16974 LOC_Os09g26940 More.. |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-3781 |
| Reference | |
|---|---|
| PubMed | 23502780 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g50940.1 |
| Rice Genome Annotation | LOC_Os03g50940.1 |
| Ricechip | LOC_Os03g50940.1 |
| KEGG | osa:4333922 dosa:Os03t0718600-00 |
| Entrez-Gene | 4333922 |